Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827475.1_cds_XP_016503094.1_16670
CDS Infomation

[gene=LOC107821186] [db_xref=GeneID:107821186] [protein=pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like] [protein_id=XP_016503094.1] [location=join(12297..12575,13628..14782)] [gbkey=CDS]
Sequence

ATGAAGCTTTCCCGTTCTACGTTAAGGAGCCAAAATTCAATATCTTATTGCAGAGCCACA
ATTAACCGTTTTTATGGCACAACAACGTCGACTAAACAAAATAACGAGGAGAGGAGTGAG
TGGGTCTACGCAAGAATTGCACCATTAGGTAGCCCAGAGGTTTCAATGGTTCCAGTATTG
GAACAATGGGTTAAAGAAGGTAATCAAGTGTTGAGAAGTGAGCTTCAGTGGATTATCAAA
AGGCTAAGGAGCTACAAAAGATACAAACATGCCCTTGAGGTATCTCATTGGATGACAGAC
AGAAGATATTTCTCCGTCCAACCTGCTGATGTTGCTACACGAATTGATTTGATGTATAAA
GTTAAAGGCCTCGAAGAGGTTGAAAAATACTTCAATAGCACTCCGCAGAAATTGAAACGC
CTGACAGTGTATACATCTCTCCTCAATTGCTATACCAGCGAGAAGTCTGCAGAGAAAGCT
GAGGCCCTAATGCAGAAACTTAGAGATATGGGGTTTGCTAAGGGTACATTGTGCTACAAT
TTGATGCTGAACCTCTATTCTAAAACAGGAAGATGGGAAAAAATGGACAATCTGATGAAT
GAAATGGAGCAGAAAGGCATAAATTTTGATGAATTCACGCTCACAATACGGTTAACTGCA
TATGCTGATGCTGGAGATTCTGATGGAGTGGATAAAATAGTAGCGATGATGGAATCTGAT
AAGCATCGCATTTTGCGGTGGGGTACTTACAGTATTGCAGCAGATATGTGTTTGAGAGTT
GGGCAGGTGGAGAAAGCTTTATCAATGCTGAATAAATTGGAGGGCATGATTGTGAGTGGT
GAGAAAAGTAATGGTGCATATAATTTATTGCTAAAACTATATGCGGAAGCTGGAAAGAAA
GAAGAGGTGCACCGATTGTGGGATTTGTACAAGCAGAAGGAGAAAATTCTTAACAAAGGT
TACATTAGTGTGATGAGCGCACTAGTGAAATTTGGTGATACAGAAGGAGTTGAGAAGATC
TTTGAGGAATGGGAATCGGAAGCTTTGTCCTATGACTTCCGAGTTCCAGACGTCTTGATT
GGTACTTACTGTAGAAATGGTCTTCTAGAGAAAGCTAAGGCCCTAGTGGACAAAGGAATG
TCAAAAGGGGGTGTTCCATGGATCACCACGTGGTGTCACTTGGCAAATGGATACATACAT
GAAGATCGAGTCCCAGAGGCTGTAGAAGCATTGAAGAAGGCCATCTCATTATGCCCGCCT
AATTATAGACCTAGCAGGGAGACCTTAGTTACATGTGTGCAATACTGGGAAAACCAGGGA
AATGTGGATAAAGCGGAGGACTTTGTAAGGTCTTTAGAAGCAGAGCATATGTTCTCGGCT
GTTTTTCGTGACAAGTTGTTGCGCTTTATTAAGGAAGAAAAACTACAGACCTGA

Peptide Sequence

PEP ID

XP_016503094.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Nicotiana tabacum]
Sequence

MKLSRSTLRSQNSISYCRATINRFYGTTTSTKQNNEERSEWVYARIAPLGSPEVSMVPVL
EQWVKEGNQVLRSELQWIIKRLRSYKRYKHALEVSHWMTDRRYFSVQPADVATRIDLMYK
VKGLEEVEKYFNSTPQKLKRLTVYTSLLNCYTSEKSAEKAEALMQKLRDMGFAKGTLCYN
LMLNLYSKTGRWEKMDNLMNEMEQKGINFDEFTLTIRLTAYADAGDSDGVDKIVAMMESD
KHRILRWGTYSIAADMCLRVGQVEKALSMLNKLEGMIVSGEKSNGAYNLLLKLYAEAGKK
EEVHRLWDLYKQKEKILNKGYISVMSALVKFGDTEGVEKIFEEWESEALSYDFRVPDVLI
GTYCRNGLLEKAKALVDKGMSKGGVPWITTWCHLANGYIHEDRVPEAVEALKKAISLCPP
NYRPSRETLVTCVQYWENQGNVDKAEDFVRSLEAEHMFSAVFRDKLLRFIKEEKLQT

Transcript Sequence

Gene sequence data has not been registered.